Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926658.1_cds_XP_016474630.1_66640

CDS Infomation

[gene=LOC107796388] [db_xref=GeneID:107796388] [protein=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic] [protein_id=XP_016474630.1] [location=complement(join(112220..112321,112875..112979,113078..113176,113256..113415,113501..113578,113808..113946,114036..114180,114352..114414,114512..114571,114722..114799,114880..114954,115045..115161,115619..115849,115945..116064,116561..116637,116721..116821,116906..117012,117493..117650,118072..118279))] [gbkey=CDS]

Sequence

ATGGCGGCAGGAGCTGTTCCAACTTCATTTACAGGCCTGAAGAGCAGGGAAAATGGTGTG
GGGTTTGCTAAAAGTTTGGACTTTGTAAGAGTTTCTGACTTACAGAGGGTTAAGTTTCGA
CGAACCAAGGTTTCTGTGATAAGAAATGCAAATCCTGGTCCAGAAACCATTGAACTTCAG
CCTGCGTCCGAAGGGAGTCCACTACTAGTTCCCAGGCAAAAGTACTGTGAATCCATACAC
AAAACTGTCAGAAGAAAGACGTGCACGGTGATGGTTGGGAACGTGGCCATTGGTAGCGAA
CATCCAATCAGAATTCAGACAATGACTACAACTGATACTAAAGATGTTGCTGCAACAGTA
GAACAGGTGATGAAAATAGCTGATGCAGGAGCTGACATAGTTCGAATTACAGTCCAAGGG
AAGAAAGAAGCTGATGCATGTTTCGAGATTAAAAATTCTCTGGTGCAAAAGAATTATAAC
ATCCCTCTGGTGGCTGACATTCATTTTGCTCCTCCTATTGCACTTCGAGTTGCGGAGTGC
TTTGAAAAAATACGTGTCAATCCTGGAAACTTTGCTGACAGGCGAGCCCAGTTTGAGCAA
TTAGAGTACACAGAAGAAGACTACCAGAAAGAACTTGAGCATATTGAGGAGGTTTTTACA
CCATTGGTGGAAAAATGTAAAAAGTACGGACGTGCAATACGTATTGGAACTAACCACGGG
AGCCTTTCAGATCGAATTATGAGCTATTATGGGGACTCACCTAGGGGAATGGTTGAATCA
GCATTTGAGTTTGCAAGAATTTGTCGAAAGTTGGACTTCCACAATTTCGTCTTCTCAATG
AAAGCTAGCAATCCAGTAGTCATGGTTCAGGCGTATCGTCTTCTTGTAGCTGAGATGTAT
GTTCAGGGATGGGATTATCCTTTACACTTGGGAGTTACTGAAGCTGGTGAAGGTGAGGAT
GGAAGGATGAAGTCTGCAATCGGTATTGGCACACTTCTTCAGGATGGTCTGGGTGATACA
ATAAGGGTTTCCCTAACTGAACCTCCAGAGGAGGAGATAGATCCCTGTCGACGATTGGCA
AACCTTGGAAAGAGAGCAGCTGAGCTTCAACAAGGAGTGGCCCCTTTTGAAGAAAAGAAC
AGACGTTATTTTGACTTTCAACGTCGGTCAGGGGAATTGCCAGCTCAAAAGGAGGGTGAT
GAAGTAGACTACAGAGGGGTGTTGCATCGAGATGGTTCTGTTCTCATGTCTGTTTCTTTG
GATCAATTGAAGACCCCTGAACTTCTGTACAGATCATTAGCGGCAAAGCTTGTCGTTGGC
ATGCCATTTAAGGATCTGGCAACTGTGGACTCAATCCTGTTGAGGGAACTTCCACCAGTA
GATGATAAAGATTCTCGCCTAGCTCTCAAAAGATTGGTTGACATAAGCATGGGAGTCATT
ACTCCTCTGTCGGAGCAATTGACAAAGCCGTTATCTAATGCCATGGTATTGGTTACTCTG
AAGGAGTTATCTGGTGGTGCTCAAAAGCTTCTTCCAGAAGGTACAAGATTGGTTGTGTAT
GTGCGTGGTGATGAATCAAAAGATGAGTTGGAAATCCTAAAGAGCACTGATGTTACTATG
ATTCTTCATAATCTCCCATATACAGAAGAAAAAATTGGCAGAGTTCATGCAGCCAGGAGG
CTTTTTGAGTATCTCTCTGAAAATTCATTGAACTTTCCCGTAATTCATCACATACACTTT
CCCAGTGATACCCACAGGGATGATTTAGTGATTGGTGCCGGGGCAAATGCAGGAGCTCTT
CTAGTAGATGGGCTCGGAGATGGTATTCTCTTGGAAGCTCCAGATCAGGATTTTGATTTT
CTCAGAAATACATCTTTCAATTTGCTTCAAGGTTGCAGAATGCGGAACACTAAAACGGAG
TACGTATCATGCCCATCGTGTGGCAGAACTTTATTTGATCTTCAAGAGATAAGTGCTCAA
ATAAGGGAGAAGACGTCACACTTGCCCGGTGTTTCAATTGCCATCATGGGTTGCATTGTG
AATGGACCTGGGGAGATGGCTGATGCTGACTTTGGATATGTTGGTGGTGCTCCTGGGAAG
ATTGACCTTTACGTCGGCAAGACGGTGGTAAAACGCGGTATTCAAATGGAGCATGCAACA
GATGCCTTGATCCAGCTAATTAAAGATAACGGTCGTTGGGTGGATCCTCCTAAGGAGGAG
TAA

Peptide Sequence

PEP ID

XP_016474630.1

PEP Infomation

PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic [Nicotiana tabacum]

Sequence

MAAGAVPTSFTGLKSRENGVGFAKSLDFVRVSDLQRVKFRRTKVSVIRNANPGPETIELQ
PASEGSPLLVPRQKYCESIHKTVRRKTCTVMVGNVAIGSEHPIRIQTMTTTDTKDVAATV
EQVMKIADAGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPPIALRVAEC
FEKIRVNPGNFADRRAQFEQLEYTEEDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNHG
SLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMY
VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA
NLGKRAAELQQGVAPFEEKNRRYFDFQRRSGELPAQKEGDEVDYRGVLHRDGSVLMSVSL
DQLKTPELLYRSLAAKLVVGMPFKDLATVDSILLRELPPVDDKDSRLALKRLVDISMGVI
TPLSEQLTKPLSNAMVLVTLKELSGGAQKLLPEGTRLVVYVRGDESKDELEILKSTDVTM
ILHNLPYTEEKIGRVHAARRLFEYLSENSLNFPVIHHIHFPSDTHRDDLVIGAGANAGAL
LVDGLGDGILLEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAQ
IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIQMEHAT
DALIQLIKDNGRWVDPPKEE

Transcript Sequence

Gene sequence data has not been registered.